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DNA sequence assembly and alignment

CodonCode Aligner Features List 〇 Import/Export 　・Import of sequence chromatograms in ABI, AB1, SCF formats 　・Import of text files in FASTA, FASTQ, Sam, GenBank, EMBL formats 　・Import of subsets of samples (e.g., every nth sample, samples matching selected sequences within a project, etc.) 〇 Sequence Editing and Trimming 　・Manual editing of sequences and contigs: deletion of samples or contig ends, splitting contigs, etc. 〇 Sequence Assembly 〇 Sequence Alignment 〇 Sequence Translation 〇 Virtual Cloning 〇 Restriction Mapping 〇 RFLP Analysis 〇 Primer Design 〇 Phylogenetic Tree 〇 Mutation Detection and Analysis 〇 Differential Table 〇 Customization 〇 Methylation Analysis

Introducing new features of 'CodonCode Aligner' for DNA sequence assembly and alignment.

New Features in Version 13 ------------------------------------------- ■Clone Validation Quickly group reads by clone, compare them with references, and verify if the sequences match the expected clones. A report will be generated that includes direct links to all mismatched positions on the alignment. ■Mutation Detection in NGS Data A new feature has been added to generate mutation reports for text sequence files. Trace files are no longer required for mutation analysis, enabling mutation detection in NGS projects. ■Cloning History Feature The history of the creation process for all cloning constructs made with the Aligner is now recorded. ■HiFi DNA Assembly A virtual cloning feature for HiFi DNA assembly has been introduced. □For more details□ (Visit the HuLinks page) https://www.hulinks.co.jp/software/codoncode-aligner/codoncode-aligner-versions/